fhirclient.models.molecularsequence.MolecularSequenceQuality Class Reference

An set of value as quality of sequence. More...

Inheritance diagram for fhirclient.models.molecularsequence.MolecularSequenceQuality:

Public Member Functions
	__init__ (self, jsondict=None, strict=True)
	Initialize all valid properties.
	elementProperties (self)
	Returns a list of tuples, one tuple for each property that should be serialized, as: ("name", "json_name", type, is_list, "of_many", not_optional)
Public Member Functions inherited from fhirclient.models.fhirabstractbase.FHIRAbstractBase
	with_json (cls, jsonobj)
	Initialize an element from a JSON dictionary or array.
	with_json_and_owner (cls, jsonobj, owner)
	Instantiates by forwarding to with_json(), then remembers the "owner" of the instantiated elements.
	update_with_json (self, jsondict)
	Update the receiver with data in a JSON dictionary.
	as_json (self)
	Serializes to JSON by inspecting elementProperties() and creating a JSON dictionary of all registered properties.
	owningResource (self)
	Walks the owner hierarchy and returns the next parent that is a DomainResource instance.
	owningBundle (self)
	Walks the owner hierarchy and returns the next parent that is a Bundle instance.
	resolvedReference (self, refid)
	Returns the resolved reference with the given id, if it has been resolved already.
	didResolveReference (self, refid, resolved)
	Called by FHIRResource when it resolves a reference.

Public Attributes
	end
	fScore
	gtFP
	method
	precision
	queryFP
	queryTP
	recall
	roc
	score
	standardSequence
	start
	truthFN
	truthTP
	type
Public Attributes inherited from fhirclient.models.backboneelement.BackboneElement
	modifierExtension
Public Attributes inherited from fhirclient.models.element.Element
	extension
	id

Static Public Attributes
str	resource_type = "MolecularSequenceQuality"
Static Public Attributes inherited from fhirclient.models.backboneelement.BackboneElement
str	resource_type = "BackboneElement"
Static Public Attributes inherited from fhirclient.models.element.Element
str	resource_type = "Element"

Additional Inherited Members
Protected Member Functions inherited from fhirclient.models.fhirabstractbase.FHIRAbstractBase
	_with_json_dict (cls, jsondict)
	Internal method to instantiate from JSON dictionary.
	_matches_type (self, value, typ)
Protected Attributes inherited from fhirclient.models.fhirabstractbase.FHIRAbstractBase
	_resolved
	_owner

Detailed Description

An set of value as quality of sequence.

An experimental feature attribute that defines the quality of the feature in a quantitative way, such as a phred quality score (SO:0001686).

Constructor & Destructor Documentation

__init__()

fhirclient.models.molecularsequence.MolecularSequenceQuality.__init__	(		self,
			jsondict = None,
			strict = True
	)

Initialize all valid properties.

   :raises: FHIRValidationError on validation errors, unless strict is False

Parameters

jsondict	dict A JSON dictionary to use for initialization
strict	bool If True (the default), invalid variables will raise a TypeError

Reimplemented from fhirclient.models.backboneelement.BackboneElement.

Member Function Documentation

elementProperties()

fhirclient.models.molecularsequence.MolecularSequenceQuality.elementProperties

(

self

)

Returns a list of tuples, one tuple for each property that should be serialized, as: ("name", "json_name", type, is_list, "of_many", not_optional)

Reimplemented from fhirclient.models.backboneelement.BackboneElement.

Member Data Documentation

end

fhirclient.models.molecularsequence.MolecularSequenceQuality.end

fScore

fhirclient.models.molecularsequence.MolecularSequenceQuality.fScore

gtFP

fhirclient.models.molecularsequence.MolecularSequenceQuality.gtFP

method

fhirclient.models.molecularsequence.MolecularSequenceQuality.method

precision

fhirclient.models.molecularsequence.MolecularSequenceQuality.precision

queryFP

fhirclient.models.molecularsequence.MolecularSequenceQuality.queryFP

queryTP

fhirclient.models.molecularsequence.MolecularSequenceQuality.queryTP

recall

fhirclient.models.molecularsequence.MolecularSequenceQuality.recall

resource_type

str fhirclient.models.molecularsequence.MolecularSequenceQuality.resource_type = "MolecularSequenceQuality"

static

roc

fhirclient.models.molecularsequence.MolecularSequenceQuality.roc

score

fhirclient.models.molecularsequence.MolecularSequenceQuality.score

standardSequence

fhirclient.models.molecularsequence.MolecularSequenceQuality.standardSequence

start

fhirclient.models.molecularsequence.MolecularSequenceQuality.start

truthFN

fhirclient.models.molecularsequence.MolecularSequenceQuality.truthFN

truthTP

fhirclient.models.molecularsequence.MolecularSequenceQuality.truthTP

type

fhirclient.models.molecularsequence.MolecularSequenceQuality.type

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The documentation for this class was generated from the following file:

• fhirclient/models/molecularsequence.py